BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C08SP1|AL429546
(827 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1778 1637 0.0
>3x_Contig1778
Length = 27694
Score = 1637 bits (825), Expect = 0.0
Identities = 826/827 (99%)
Strand = Plus / Plus
Query: 1 gatcagaccagtactacgtattacctttgcttgcaatagtcggaaattgtagctacggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3274 gatcagaccagtactacgtattacctttgcttgcaatagtcggaaattgtagctacggag 3333
Query: 61 tcattaatgttgtaggaaactcattgttaccagtgtttgtgggatttttggttggaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3334 tcattaatgttgtaggaaactcattgttaccagtgtttgtgggatttttggttggaaatg 3393
Query: 121 aagatcagctggaagttgatatcaaaacttctattataagcggtcgtggtgcttcttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3394 aagatcagctggaagttgatatcaaaacttctattataagcggtcgtggtgcttcttatg 3453
Query: 181 gatatttcagtgcgcttatcgtacaattattttcaatattgttggtaaaacaaagcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3454 gatatttcagtgcgcttatcgtacaattattttcaatattgttggtaaaacaaagcaaaa 3513
Query: 241 accacgacaatcttcaaatagcgattctatttgtaggcttatggtggttactgtggcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3514 accacgacaatcttcaaatagcgattctatttgtaggcttatggtggttactgtggcaaa 3573
Query: 301 taccgatagcatttttgttacaggatatcccccgtgacacagatcaagaacagcatgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3574 taccgatagcatttttgttacaggatatcccccgtgacacagatcaagaacagcatgagt 3633
Query: 361 ttacatgggccaacaccggaaattatatggaatacggctggaactcattgtgggagtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3634 ttacatgggccaacaccggaaattatatggaatacggctggaactcattgtgggagtcat 3693
Query: 421 tgaagcacgcmagattgttgaaagacgtggtaatctttctcattgggtggtttattatat 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3694 tgaagcacgcaagattgttgaaagacgtggtaatctttctcattgggtggtttattatat 3753
Query: 481 ctgattctttgacgacaattaactctactgccattttgtttgccaaaacggagttgaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3754 ctgattctttgacgacaattaactctactgccattttgtttgccaaaacggagttgaaga 3813
Query: 541 tgacagctataaatctaattactctaagtatcataacgatggttatggcaatgcttggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3814 tgacagctataaatctaattactctaagtatcataacgatggttatggcaatgcttggtg 3873
Query: 601 ctgtctacataccccatttattaagcgaacgtttgagacttcccttgcagcaggttttga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3874 ctgtctacataccccatttattaagcgaacgtttgagacttcccttgcagcaggttttga 3933
Query: 661 tcattataatcatttggtctagtgttattccattgtatgggatgacgggatttgtattcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3934 tcattataatcatttggtctagtgttattccattgtatgggatgacgggatttgtattcc 3993
Query: 721 aaaacattggtttgaaacacaaatttgagatgtatatcttgggagtgtggtatggtgtgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3994 aaaacattggtttgaaacacaaatttgagatgtatatcttgggagtgtggtatggtgtgt 4053
Query: 781 ccttgggaggcttagctgctgtgtcgcgttcgttattcagtttgctt 827
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4054 ccttgggaggcttagctgctgtgtcgcgttcgttattcagtttgctt 4100
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5936
Number of Sequences: 1807
Number of extensions: 5936
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 827
length of database: 10,358,551
effective HSP length: 16
effective length of query: 811
effective length of database: 10,329,639
effective search space: 8377337229
effective search space used: 8377337229
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)